Cancer-miRNA
Regulatory Network
Compendium of
miRNA Target Genes
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AD Lung Beer Cluster Number 20 (194 genes)
This page contains all miRNA mediated regulation and functional enrichment for AD Lung Beer cluster number 20. Information about lung cancer can be found on Wikipedia, and further information about the "AD Lung Beer" dataset can be found in Beer et al., 2002.
Inferred miRNA Mediated Regulation
Weeder-miRvestigator PITA TargetScan
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Gene Ontology Enrichment
GO ID GO Term Annotated Genes in Cluster
GO:0000075 cell cycle checkpoint 26
GO:0000077 DNA damage checkpoint 13
GO:0000082 G1/S transition of mitotic cell cycle 22
GO:0000084 S phase of mitotic cell cycle 24
GO:0000086 G2/M transition of mitotic cell cycle 8
GO:0000087 M phase of mitotic cell cycle 14
GO:0000216 M/G1 transition of mitotic cell cycle 16
GO:0000236 mitotic prometaphase 7
GO:0000278 mitotic cell cycle 45
GO:0000279 M phase 20
GO:0000280 nuclear division 13
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 5
GO:0000375 RNA splicing, via transesterification reactions 19
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 18
GO:0000387 spliceosomal snRNP assembly 7
GO:0000398 nuclear mRNA splicing, via spliceosome 18
GO:0000722 telomere maintenance via recombination 8
GO:0000723 telomere maintenance 9
GO:0000724 double-strand break repair via homologous recombination 5
GO:0000725 recombinational repair 5
GO:0000729 DNA double-strand break processing 2
GO:0000956 nuclear-transcribed mRNA catabolic process 7
GO:0002200 somatic diversification of immune receptors 5
GO:0002562 somatic diversification of immune receptors via germline recombination within a single locus 5
GO:0006082 organic acid metabolic process 22
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 117
GO:0006144 purine base metabolic process 5
GO:0006188 IMP biosynthetic process 4
GO:0006189 'de novo' IMP biosynthetic process 2
GO:0006220 pyrimidine nucleotide metabolic process 5
GO:0006221 pyrimidine nucleotide biosynthetic process 5
GO:0006259 DNA metabolic process 46
GO:0006260 DNA replication 25
GO:0006261 DNA-dependent DNA replication 16
GO:0006265 DNA topological change 3
GO:0006266 DNA ligation 3
GO:0006268 DNA unwinding involved in replication 4
GO:0006270 DNA-dependent DNA replication initiation 5
GO:0006271 DNA strand elongation involved in DNA replication 13
GO:0006281 DNA repair 24
GO:0006283 transcription-coupled nucleotide-excision repair 11
GO:0006284 base-excision repair 5
GO:0006289 nucleotide-excision repair 11
GO:0006297 nucleotide-excision repair, DNA gap filling 7
GO:0006302 double-strand break repair 7
GO:0006308 DNA catabolic process 7
GO:0006309 DNA fragmentation involved in apoptotic nuclear change 4
GO:0006310 DNA recombination 18
GO:0006312 mitotic recombination 8
GO:0006323 DNA packaging 10
GO:0006325 chromatin organization 16
GO:0006333 chromatin assembly or disassembly 7
GO:0006334 nucleosome assembly 6
GO:0006352 transcription initiation, DNA-dependent 8
GO:0006353 transcription termination, DNA-dependent 10
GO:0006354 transcription elongation, DNA-dependent 10
GO:0006366 transcription from RNA polymerase II promoter 28
GO:0006367 transcription initiation from RNA polymerase II promoter 7
GO:0006368 transcription elongation from RNA polymerase II promoter 10
GO:0006369 termination of RNA polymerase II transcription 8
GO:0006370 mRNA capping 5
GO:0006396 RNA processing 32
GO:0006397 mRNA processing 27
GO:0006401 RNA catabolic process 7
GO:0006402 mRNA catabolic process 7
GO:0006403 RNA localization 9
GO:0006406 mRNA export from nucleus 5
GO:0006412 translation 18
GO:0006418 tRNA aminoacylation for protein translation 5
GO:0006457 protein folding 9
GO:0006458 'de novo' protein folding 5
GO:0006508 proteolysis 24
GO:0006511 ubiquitin-dependent protein catabolic process 21
GO:0006520 cellular amino acid metabolic process 19
GO:0006521 regulation of cellular amino acid metabolic process 10
GO:0006607 NLS-bearing substrate import into nucleus 3
GO:0006725 cellular aromatic compound metabolic process 10
GO:0006807 nitrogen compound metabolic process 121
GO:0006913 nucleocytoplasmic transport 11
GO:0006915 apoptosis 34
GO:0006950 response to stress 54
GO:0006974 response to DNA damage stimulus 38
GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest 10
GO:0006996 organelle organization 46
GO:0007017 microtubule-based process 13
GO:0007049 cell cycle 58
GO:0007051 spindle organization 5
GO:0007067 mitosis 13
GO:0007093 mitotic cell cycle checkpoint 15
GO:0007346 regulation of mitotic cell cycle 19
GO:0008152 metabolic process 157
GO:0008334 histone mRNA metabolic process 7
GO:0008380 RNA splicing 21
GO:0009056 catabolic process 42
GO:0009057 macromolecule catabolic process 37
GO:0009058 biosynthetic process 95
GO:0009059 macromolecule biosynthetic process 73
GO:0009112 nucleobase metabolic process 8
GO:0009113 purine base biosynthetic process 4
GO:0009116 nucleoside metabolic process 7
GO:0009126 purine nucleoside monophosphate metabolic process 5
GO:0009127 purine nucleoside monophosphate biosynthetic process 5
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 2
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 2
GO:0009152 purine ribonucleotide biosynthetic process 8
GO:0009156 ribonucleoside monophosphate biosynthetic process 6
GO:0009161 ribonucleoside monophosphate metabolic process 6
GO:0009165 nucleotide biosynthetic process 14
GO:0009167 purine ribonucleoside monophosphate metabolic process 5
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 5
GO:0009218 pyrimidine ribonucleotide metabolic process 3
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 2
GO:0009260 ribonucleotide biosynthetic process 10
GO:0009308 amine metabolic process 21
GO:0009452 RNA capping 5
GO:0009987 cellular process 181
GO:0010467 gene expression 76
GO:0010498 proteasomal protein catabolic process 18
GO:0010564 regulation of cell cycle process 30
GO:0010833 telomere maintenance via telomere lengthening 8
GO:0012501 programmed cell death 35
GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport 9
GO:0016032 viral reproduction 29
GO:0016043 cellular component organization 68
GO:0016070 RNA metabolic process 67
GO:0016071 mRNA metabolic process 38
GO:0016444 somatic cell DNA recombination 5
GO:0017085 response to insecticide 3
GO:0019058 viral infectious cycle 13
GO:0019080 viral genome expression 8
GO:0019083 viral transcription 8
GO:0019538 protein metabolic process 65
GO:0019752 carboxylic acid metabolic process 22
GO:0019941 modification-dependent protein catabolic process 21
GO:0022402 cell cycle process 52
GO:0022403 cell cycle phase 50
GO:0022415 viral reproductive process 13
GO:0022607 cellular component assembly 29
GO:0022613 ribonucleoprotein complex biogenesis 13
GO:0022616 DNA strand elongation 13
GO:0030163 protein catabolic process 22
GO:0030262 apoptotic nuclear change 5
GO:0030330 DNA damage response, signal transduction by p53 class mediator 12
GO:0031100 organ regeneration 4
GO:0031123 RNA 3'-end processing 9
GO:0031124 mRNA 3'-end processing 9
GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process 13
GO:0031440 regulation of mRNA 3'-end processing 2
GO:0031497 chromatin assembly 6
GO:0031570 DNA integrity checkpoint 13
GO:0031571 mitotic cell cycle G1/S transition DNA damage checkpoint 10
GO:0031575 mitotic cell cycle G1/S transition checkpoint 10
GO:0032075 positive regulation of nuclease activity 2
GO:0032200 telomere organization 9
GO:0032201 telomere maintenance via semi-conservative replication 8
GO:0032392 DNA geometric change 4
GO:0032508 DNA duplex unwinding 4
GO:0033238 regulation of cellular amine metabolic process 11
GO:0033554 cellular response to stress 43
GO:0034404 nucleobase, nucleoside and nucleotide biosynthetic process 15
GO:0034621 cellular macromolecular complex subunit organization 24
GO:0034622 cellular macromolecular complex assembly 21
GO:0034641 cellular nitrogen compound metabolic process 121
GO:0034645 cellular macromolecule biosynthetic process 72
GO:0034654 nucleobase, nucleoside, nucleotide and nucleic acid biosynthetic process 15
GO:0034660 ncRNA metabolic process 16
GO:0034728 nucleosome organization 6
GO:0042770 signal transduction in response to DNA damage 12
GO:0043038 amino acid activation 5
GO:0043039 tRNA aminoacylation 5
GO:0043085 positive regulation of catalytic activity 22
GO:0043086 negative regulation of catalytic activity 13
GO:0043161 proteasomal ubiquitin-dependent protein catabolic process 17
GO:0043170 macromolecule metabolic process 133
GO:0043632 modification-dependent macromolecule catabolic process 21
GO:0043933 macromolecular complex subunit organization 30
GO:0044237 cellular metabolic process 152
GO:0044238 primary metabolic process 150
GO:0044248 cellular catabolic process 39
GO:0044249 cellular biosynthetic process 95
GO:0044257 cellular protein catabolic process 21
GO:0044260 cellular macromolecule metabolic process 130
GO:0044265 cellular macromolecule catabolic process 35
GO:0044267 cellular protein metabolic process 64
GO:0044419 interspecies interaction between organisms 18
GO:0045931 positive regulation of mitotic cell cycle 4
GO:0046040 IMP metabolic process 4
GO:0046112 nucleobase biosynthetic process 5
GO:0046683 response to organophosphorus 2
GO:0046782 regulation of viral transcription 7
GO:0046796 viral genome transport in host cell 2
GO:0048285 organelle fission 13
GO:0048524 positive regulation of viral reproduction 8
GO:0050000 chromosome localization 3
GO:0050434 positive regulation of viral transcription 7
GO:0050657 nucleic acid transport 9
GO:0050658 RNA transport 9
GO:0050792 regulation of viral reproduction 9
GO:0051028 mRNA transport 8
GO:0051052 regulation of DNA metabolic process 8
GO:0051084 'de novo' posttranslational protein folding 4
GO:0051169 nuclear transport 11
GO:0051236 establishment of RNA localization 9
GO:0051246 regulation of protein metabolic process 35
GO:0051276 chromosome organization 31
GO:0051301 cell division 16
GO:0051303 establishment of chromosome localization 3
GO:0051320 S phase 25
GO:0051325 interphase 37
GO:0051329 interphase of mitotic cell cycle 36
GO:0051340 regulation of ligase activity 14
GO:0051351 positive regulation of ligase activity 14
GO:0051352 negative regulation of ligase activity 11
GO:0051436 negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle 11
GO:0051437 positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle 13
GO:0051438 regulation of ubiquitin-protein ligase activity 14
GO:0051439 regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle 13
GO:0051443 positive regulation of ubiquitin-protein ligase activity 14
GO:0051444 negative regulation of ubiquitin-protein ligase activity 11
GO:0051603 proteolysis involved in cellular protein catabolic process 21
GO:0051704 multi-organism process 25
GO:0051726 regulation of cell cycle 38
GO:0051984 positive regulation of chromosome segregation 2
GO:0051987 positive regulation of attachment of spindle microtubules to kinetochore 2
GO:0051988 regulation of attachment of spindle microtubules to kinetochore 2
GO:0060249 anatomical structure homeostasis 10
GO:0065003 macromolecular complex assembly 28
GO:0065004 protein-DNA complex assembly 8
Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations
miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value

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